Early Access

Accurately and preoperatively predicting survival for high-grade gliomas (HGGs) is important for optimizing treatment strategies. Increasing evidence suggests that brain structural and functional connectivity networks derived from advanced magnetic resonance imaging (MRI) are promising predictors for HGG survival. However, advanced MRIs (e.g., diffusion MRI and functional MRI) are generally clinic...

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Timely identification of Alzheimer’s disease (AD) benefits from combining neuroimaging, fluid biomarkers, and cognitive assessments, yet in practice one or more modalities are often unavailable due to various factors such as cost, patient compliance, and procedural risks. Furthermore, conventional convolutional neural network (CNN) architectures and even Transformer-based models struggle to effici...

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Pneumonia is an acute respiratory infection, posing a serious threat to health and lives. Lung ultrasound (LUS), as a non-invasive and rapid imaging technique, can monitor real-time changes in lung, providing valuable assistance in clinical diagnosis. However, most LUS studies are limited to frame-level analysis and ignore respiratory cycle changes, leading to diagnostic errors. To address these p...

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Conventional registration approaches frequently underperform when applied to sparse feature alignment (e.g., retinal vessels and filamentous collagen fibers in second-harmonic generation (SHG) and bright-field (BF) images), as these tasks demand simultaneous handling of global affine registration and local deformation correction. End-to-end learning-based approaches struggle with minimal effective...

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Objective, task-based measures of image quality (IQ) have been widely advocated for assessing and optimizing medical imaging technologies. Besides signal detection theory-based measures, information-theoretic quantities have been proposed to quantify task-based IQ. For example, task-specific information (TSI), defined as the mutual information between an image and a task variable, represents an op...

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Cardiac Magnetic Resonance (CMR) imaging is widely used to personalize heart models for cardiac digital twin analysis because of its ability to visualize soft tissues and capture dynamic functions. However, CMR images have an anisotropic nature, characterized by large inter-slice distances and misalignments from cardiac motion. These limitations result in data loss and measurement inaccuracies, hi...

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Focused transmits are the most commonly used transmit strategy for echocardiograms, but suffer from relatively low frame rates, and in 3D, even lower volume rates. Fast imaging based on unfocused transmits has disadvantages such as motion decorrelation and limited harmonic imaging capabilities. This work introduces a patient-adaptive focused transmit and receive scheme that has the ability to dras...

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Clinically, bi-parametric MRI (bp-MRI), including T2-weighted imaging, diffusion-weighted imaging, and apparent diffusion coefficient map, offers essential prior localization of biopsy and focal therapy for suspicious clinically significant prostate cancer (csPCa), and accurate csPCa delineation from bp-MRI is crucial for better outcomes. However, due to the complexity and high variability in appe...

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Low light conditions in endoscopic imaging would lead to poor visibility, reduced contrast, and increased noise, which may hinder accurate diagnosis and surgical guidance. Against this low-light endoscopic image enhancement (LLEIE) task, inspired by the remarkable performance of pretrained CLIP in downstream vision tasks, in this paper, we carefully investigate the pretrained priors of CLIP and em...

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Whole slide image (WSI) classification is a critical task in computational pathology and is aimed at providing automated diagnostic support through high-resolution tissue image analysis. In weakly supervised WSI classification scenarios, the main challenge concerns the traditional multiple instance learning (MIL) methods, which rely on instance-level embeddings aggregated by an attention-based poo...

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Chest X-Ray Vision-Language pretraining (VLP) leverages large-scale radiograph-report pairs to develop joint image-text representations, demonstrating significant potential for medical image diagnosis. However, existing VLP approaches often overlook the multi-view nature of chest X-Rays, and some multi-view methods apply uniform feature fusion, neglecting view-key semantic contributions. Moreover, random cross-modal Masked Language Modeling (MLM) fails to facilitate effective interactions, impeding representation alignment. Additionally, global alignment in VLP may lead to the false-negative problem. To address these limitations, we propose a novel medical VLP framework comprising three core components. First, a Key Semantics-enhanced Multi-view MLM module aggregates pathology-relevant patches across views, providing semantically rich supervision for MLM. A local semantics enhancing approach, which identifies and aggregates pathology-relevant key patches across views to guide MLM. Second, a Frontal-Lateral Alignment module extracts view-specific pathological features, ensuring semantic consistency and preserving critical information during aggregation. This module independently extracts pathological features from both views to preserve view-specific information while ensuring semantic consistency, which mitigates the loss of crucial information during aggregation. Third, a High-order Semantic Alignment approach mitigates false-negative issues by aligning features with semantically consistent clusters, enhancing global alignment through prototype-level semantics. Extensive experiments across seven public datasets demonstrate that our framework outperforms state-of-the-art methods in four downstream tasks, validating its efficacy. The code is available at https://github.com/sajiutea/F-L.

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Age-related macular degeneration with abnormal blood vessel growth (neovascular AMD) is the leading cause of vision loss in elderly populations. While anti-VEGF injections are the standard treatment, they present financial burdens for patients and vary in effectiveness. Predicting treatment efficacy is therefore crucial for patient care. Current prediction methods fail to fully integrate informati...

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Accurate identification of neurological disorders such as Alzheimer’s disease (AD), Parkinson’s disease (PD), and Autism Spectrum Disorder (ASD) is challenging due to subtle early-stage symptoms and heterogeneous brain dynamics. Resting-state functional MRI (rs-fMRI) enables the construction of functional brain networks, where Graph Neural Networks (GNNs) have shown promise for disease classificat...

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Domain adaptation methods aim to bridge the gap between datasets by enabling knowledge transfer across domains, reducing the need for additional expert annotations. However, many approaches struggle with reliability in the target domain, an issue particularly critical in medical image segmentation, where accuracy and anatomical validity are essential. This challenge is further exacerbated in spati...

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Coronary computed tomography angiography (CCTA) is a pivotal non-invasive imaging modality for diagnosing cardiac disease. However, due to the temporal resolution limitations, cardiac structures, specifically coronary arteries, may suffer from motion artifacts when CCTA is applied to patients with arrhythmias or high heart rates. Limited-angle CT (LA-CT) emerges as a promising alternative by signi...

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Universal medical image registration through a single model handling various registration tasks has attracted increasing interest. However, existing deep learning-based methods face two major challenges in adapting to universal registration tasks: 1) they lack generalizable feature representation capabilities for cross-task registration; 2) they rely solely on model architectures with fixed parame...

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Organoids are three-dimensional (3D) in vitro models for studying tissue development, disease progression, and physiological responses. Holotomography (HT) enables long-term, label-free imaging of live organoids by reconstructing volumetric refractive-index (RI) maps, but quantitative analysis is limited by the missing-cone artifact, which introduces anisotropic resolution and axial distortion. Here, we present a quantitative analysis framework that addresses the missing-cone problem at the level of image representation rather than reconstruction. We introduce morphology-preserving holotomography (MP-HT), a torus-shaped spatial filtering strategy that emphasizes high-spatial-frequency RI texture while suppressing low-frequency components most susceptible to missing-cone-induced distortion. Based on MP-HT, we develop a 3D segmentation pipeline for robust separation of epithelial and luminal structures, together with a model-based RI quantification approach that incorporates the system point spread function to enable morphology-independent estimation of dry-mass density and total dry mass. We apply the framework to long-term imaging of live hepatic organoids undergoing expansion, collapse, and fusion. In representative organoids, the framework provides consistent segmentation across diverse geometries and enables quantitative characterization of epithelial-lumen remodeling, collapse-associated loss of morphometric stability, and transient biophysical fluctuations during fusion. Overall, this work establishes a physically transparent and reproducible approach for quantitative, label-free analysis of organoid dynamics in 3D.

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Dynamic total body positron emission tomography (TB-PET) makes it feasible to measure the kinetics of the tracer in all organs of the body simultaneously which may lead to important applications in multi-organ disease and systems physiology. Since whole-body kinetics are highly heterogeneous with variable signal-to-noise ratios, parametric images should ideally comprise not only point estimates bu...

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3D brain MRI studies often examine subtle morphometric differences between cohorts that are hard to detect visually. Given the high cost of MRI acquisition, these studies could greatly benefit from image syntheses, particularly counterfactual image generation, as has been the case for applications in computer vision. However, counterfactual models struggle to produce anatomically plausible MRIs du...

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Deep learning (DL) methods can reconstruct highly accelerated magnetic resonance imaging (MRI) scans, but they rely on application-specific large training datasets and often generalize poorly to out-of-distribution data. Self-supervised deep learning algorithms perform scan-specific reconstructions, but still require complicated hyperparameter tuning based on the acquisition and often offer limite...

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Metadata-guided cross-modality 3D MRI synthesis aims to generate target-contrast volumes from source-modality data conditioned on clinically available metadata, which is important for enhancing clinical imaging flexibility. However, existing methods still suffer from two main limitations: 1) They neglect spatial dependencies within volumetric representations, yielding structurally ambiguous featur...

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With the growing application of deep learning (DL) in dental image analysis, numerous datasets and models have been proposed. Periapical radiographs (PR), as one of the most common imaging modalities in clinical dentistry, play a critical role in endodontics. However, due to the high cost of manual annotation and interpretation challenges caused by poor projection and imaging artifacts, publicly a...

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Accurate multi-organ segmentation across heterogeneous medical images is pivotal for real-world surgical navigation. The scarcity of annotation constitutes a well-established consensus in the field, prompting semi-supervised learning to emerge as a prominent solution. However, two critical bottlenecks persist in clinical translation: (1) inter-class feature ambiguity, and (2) high multi-source sam...

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The ability to learn sequentially from different data sites is crucial for a deep network in solving practical medical image diagnosis problems due to privacy restrictions and storage limitations. However, adapting to the incoming site leads to catastrophic forgetting on past sites and decreases generalizability on unseen sites. Existing Continual Learning (CL) and Domain Generalization (DG) metho...

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Following successful large-vessel recanalization via endovascular thrombectomy (EVT) for acute ischemic stroke (AIS), some patients experience a complication known as no-reflow, defined by persistent microvascular hypoperfusion that undermines tissue recovery and worsens clinical outcomes. Although prompt identification is crucial, standard clinical practice relies on perfusion magnetic resonance ...

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